CDS

Accession Number TCMCG042C71502
gbkey CDS
Protein Id XP_016503638.1
Location complement(join(49568..50053,52701..52868,52961..53161,54164..54293,54423..54556))
Gene LOC107821704
GeneID 107821704
Organism Nicotiana tabacum

Protein

Length 372aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016648152.1
Definition PREDICTED: ribosome maturation protein SBDS-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category J
Description Shwachman-Bodian-Diamond syndrome (SBDS) protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14574        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000922        [VIEW IN EMBL-EBI]
GO:0001501        [VIEW IN EMBL-EBI]
GO:0001503        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002520        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0007052        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008017        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030282        [VIEW IN EMBL-EBI]
GO:0030595        [VIEW IN EMBL-EBI]
GO:0031214        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042256        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043022        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048534        [VIEW IN EMBL-EBI]
GO:0048539        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050900        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060326        [VIEW IN EMBL-EBI]
GO:0060348        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902850        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGAAAACACTGGTACAGCCGATAGGCCAAAAGCGACTTACGAATGTCGCCGTTGTGCGTCTCAAGAAGCACGGTAATCGGTTTGAAATCGCCTGTTATAAGAATAAAGTCCTCTCATGGCGTTCTGGCGTAGAGAAAGACTTGGATGAAGTGTTGCAGTCACAAACTGTATACTCAAATGTGTCTAAGGGTGTACTTGCTAAGTCTAAAGATTTGATTGCTGCTTTTGGAACTGATGATCAGTCCAAAATCTGCCTGGAGATTTTGGACAAAGGAGAGCTGCAAGTTGCAGGAAAGGAGAGGGAATCACAGTTTTCAAGCCAGTTCAGGGATATTGCTACTATAGTTATGCAGAAGACAATCAACCCTGAAACTCAGCGTCCATATACAATTAGCATGATTGAGCGGCTGATGCATGAAATCCATTTTGCTGTTGATCCAAATAGCAGCTCAAAGAAACAGGCACTAGAGGTCATTCGGGAGCTTCAAAAGCACTACCCCATTAAACGGGCTCCCATGAGGCTGAGGATACATGTACCGGAACAGAGGAGCCCTTCCGTGTTGGACAAACTGAAGGAATGGAATGCCTCCATTGTGTCAAGAGAAGAATCTGGAAGTCAGCACTCCATAATTTGTGAGATTGAACCTAGTCTTTTCCGGGACTGTGATGCCTTGATCAGGAATTTACAGGGGAGGTTGGAAATTCTTGCAGTCAATGTACATGTGGAAGGAGATACCTTTGTTGATCAGTACGATGATCACGAGGACGAGCCATCAAGTTTACGGAAGGATTCTACAGGTTCTGTCCTTCAGCTGAGTGAGAAAATGCAAAAGCAGACCATTTCTTCAGAAAGTGGCAATTCTAGGGGAGAAGTAAAACTGAACAAACCTGCCACAACTGGGAGTTCCGAGGGTGAAGTAAAACTGAACAAGTGCACTACTTGCAACGCTGTTGTGGGAGATTCAAAAGAATACAGAGAGCATTTTAAGAGTGACTGGCATAAGCATAATCTTAGGCGAAAAACTAGGCAACTTCCTCCACTTACAGTGGAAGAATGTATGGCAGACCTGGAACTTGGAGACTCGAAGGCTGATCTTAAAGAATATTCATTTTAA
Protein:  
MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYSNVSKGVLAKSKDLIAAFGTDDQSKICLEILDKGELQVAGKERESQFSSQFRDIATIVMQKTINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRAPMRLRIHVPEQRSPSVLDKLKEWNASIVSREESGSQHSIICEIEPSLFRDCDALIRNLQGRLEILAVNVHVEGDTFVDQYDDHEDEPSSLRKDSTGSVLQLSEKMQKQTISSESGNSRGEVKLNKPATTGSSEGEVKLNKCTTCNAVVGDSKEYREHFKSDWHKHNLRRKTRQLPPLTVEECMADLELGDSKADLKEYSF